| Protein: | GAT22_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 352 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GAT22_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
148.0 | [0..197] | [333..70] |
|
Region A: Residues: [1-187] |
1 11 21 31 41 51
| | | | | |
1 MGSNFHYTID LNEDQNHQPF FASLGSSLHH HLQQQQQQQQ HFHHQASSNP SSLMSPSLSY 60
61 FPFLINSRQD QVYVGYNNNT FHDVLDTHIS QPLETKNFVS DGGSSSSDQM VPKKETRLKL 120
121 TIKKKDNHQD QTDLPQSPIK DMTGTNSLKW ISSKVRLMKK KKAIITTSDS SKQHTNNDQS 180
181 SNLSNSE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [188-264] |
1 11 21 31 41 51
| | | | | |
1 RQNGYNNDCV IRICSDCNTT KTPLWRSGPR GPKSLCNACG IRQRKARRAA MATATATAVS 60
61 GVSPPVMKKK MQNKNKI
|
| Detection Method: | |
| Confidence: | 14.221849 |
| Match: | 4gatA |
| Description: | Erythroid transcription factor GATA-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.270879137859077 | bayes_pls_golite062009 |
|
Region A: Residues: [265-352] |
1 11 21 31 41 51
| | | | | |
1 SNGVYKILSP LPLKVNTCKR MITLEETALA EDLETQSNST MLSSSDNIYF DDLALLLSKS 60
61 SAYQQVFPQD EKEAAILLMA LSHGMVHG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
