| Protein: | PME45_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 609 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PME45_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
580.0 | [0..1] | [609..1] |
|
Region A: Residues: [1-83] |
1 11 21 31 41 51
| | | | | |
1 MAFQDFDKIQ ERVNAERKRK FRKRIILGVV SVLVVAAAII GGAFAYVTYE NKTQEQGKTT 60
61 NNKSKDSPTK SESPSPKPPS SAA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [84-259] |
1 11 21 31 41 51
| | | | | |
1 QTVKAGQVDK IIQTLCNSTL YKPTCQNTLK NETKKDTPQT DPRSLLKSAI VAVNDDLDQV 60
61 FKRVLSLKTE NKDDKDAIAQ CKLLVDEAKE ELGTSMKRIN DSEVNNFAKI VPDLDSWLSA 120
121 VMSYQETCVD GFEEGKLKTE IRKNFNSSQV LTSNSLAMIK SLDGYLSSVP KVKTRL
|
| Detection Method: | |
| Confidence: | 21.0 |
| Match: | 1xg2B |
| Description: | Crystal structure of the complex between pectin methylesterase and its inhibitor protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [260-609] |
1 11 21 31 41 51
| | | | | |
1 LLEARSSAKE TDHITSWLSN KERRMLKAVD VKALKPNATV AKDGSGNFTT INAALKAMPA 60
61 KYQGRYTIYI KHGIYDESVI IDKKKPNVTM VGDGSQKTIV TGNKSHAKKI RTFLTATFVA 120
121 QGEGFMAQSM GFRNTAGPEG HQAVAIRVQS DRSVFLNCRF EGYQDTLYAY THRQYYRSCV 180
181 IIGTVDFIFG DAAAIFQNCD IFIRKGLPGQ KNTVTAQGRV DKFQTTGFVI HNCTVAPNED 240
241 LKPVKAQFKS YLGRPWKPHS RTVVMESTIE DVIDPVGWLR WQETDFAIDT LSYAEYKNDG 300
301 PSGATAARVK WPGFRVLNKE EAMKFTVGPF LQGEWIQAIG SPVKLGLYDA
|
| Detection Method: | |
| Confidence: | 102.0 |
| Match: | 1xg2A |
| Description: | Crystal structure of the complex between pectin methylesterase and its inhibitor protein |
| Matching Structure (courtesy of the PDB): |
|
