| Protein: | gi|7268199, gi|5... |
| Organism: | Arabidopsis thaliana |
| Length: | 343 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7268199, gi|5....
| Description | E-value | Query Range |
Subject Range |
|
|
347.0 | [0..1] | [337..1] |
|
Region A: Residues: [1-108] |
1 11 21 31 41 51
| | | | | |
1 MGFKRKKDDG DGEEMESDVR GKSTFSGGEK RNVILPSMIK NKDKRSKVYA KQKHEKKLEK 60
61 QKKIRARDAA EKRALELGEE PPQKMIPKTI ENTRESDETV CRPDDEEL
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [109-227] |
1 11 21 31 41 51
| | | | | |
1 FADIDADEFN PVLRREIAPK VLLTTCRFNS TRGPALISEL LSVIPNSHYQ KRGTYDLKKI 60
61 VEYATKKDFT SLIVVHTNRR EPDALLIIGL PNGPTAHFKL SNLVLRKDIK NHGNPTSHQ
|
| Detection Method: | |
| Confidence: | 16.221849 |
| Match: | 2cxhA |
| Description: | Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| aminoacyl-tRNA ligase activity | 3.58650371779212 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 3.58624422951947 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 3.58624422951947 | bayes_pls_golite062009 |
| ligase activity | 2.71574082295198 | bayes_pls_golite062009 |
| proline-tRNA ligase activity | 2.35871952544841 | bayes_pls_golite062009 |
| binding | 1.78917266819015 | bayes_pls_golite062009 |
| catalytic activity | 0.902495165806215 | bayes_pls_golite062009 |
| protein binding | 0.665778090365515 | bayes_pls_golite062009 |
|
Region A: Residues: [228-343] |
1 11 21 31 41 51
| | | | | |
1 PELVLNNFTT RLGNRVGRFF QSLFPPDPNF RGRRVVTFHN QRDFIFFRHH RYIFETKESK 60
61 SDKGKEETIK PRLQECGPRF TLKLVTLQHG TFDTKGGEFE WVHKPEMDTS RRRFFL
|
| Detection Method: | |
| Confidence: | 1.7 |
| Match: | 2cxhA |
| Description: | Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1 |
| Matching Structure (courtesy of the PDB): |
|
