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View Structure Prediction Details

Protein: gi|15232942, gi|...
Organism: Arabidopsis thaliana
Length: 396 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15232942, gi|....

Description E-value Query
Range
Subject
Range
gi|27804770 - gi|27804770|gb|AAO22210.1| putative stearoyl-acyl carrier protein desaturase [Tropaeolum majus]
617.0 [0..1] [396..1]

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Predicted Domain #1
Region A:
Residues: [1-396]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLLNSTMT VAMKQNPATA VSFMQTTCLG SSFSPPRHLQ VSKTFRPIKE VSNQVTHTIT  60
   61 QEKLEIFKSM ENWAQENLLS YLKPVETSWQ PQDFLPETKD EDRFYEQVKE LRDRTKEIPD 120
  121 DYFVVLVGDM ITEEALPTYQ TVMNTLDGAK DETGVSLTPW AVWLRAWTAE ENRHGDLLNK 180
  181 YLYLSGRVDT RHVEKTIQYL IGSGMDTKYE NNPYNGYIYT SFQERATFIS HANTAKLATT 240
  241 YGDTTLAKIC GTIAADEKRH EMAYTRIVEK LFEIDPDGTV QALASMMRKR ITMPAQLMHD 300
  301 GRDDNLFDHY AAVAQRIGVY TATDYAGILE FLLRRWEVEK LGMGLSGEGR RAQDYLCTLP 360
  361 QRIRRLEERA DDRVKRASKS KPSVSFSWIY GREVEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 169.0
Match: 1oq4A
Description: delta 9-stearoyl-acyl carrier protein desaturase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle