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View Structure Prediction Details

Protein: gi|91806856, gi|...
Organism: Arabidopsis thaliana
Length: 587 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|91806856, gi|....

Description E-value Query
Range
Subject
Range
gi|4468805, gi|1... - pir||T04733 auxin-regulated protein GH3 homolog F6G17.40 - Arabidopsis thaliana, gi|7270721|emb|CAB...
925.0 [0..4] [586..15]

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Predicted Domain #1
Region A:
Residues: [1-587]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPKFDLTDP KASLSLLEDV TTNVTQIQDS ILEAVLSRNA HTEYLKGFLN GQVDKQTFKK  60
   61 NVPIVTYEDI KPYINRIANG EASDLICDRP ISLLVMSSGT TAGIQNLIPL TTEDGEQRIM 120
  121 FGSLYRSLLY KYVEGIREGK SLTFYFVNPE RETASGILIR TMITCILKSV NKTNSSLWDR 180
  181 LQISPHEIST CEDTTQSMYC QLLCGLLQRD NVARLGAPFA SVFIRVIKYL EGHWQELCSN 240
  241 IRTGRLSDWI TDPQCVSGIS KFLTAPNPDL ASLIEQECSK TSWEAIVKRL WPKAKCVEAV 300
  301 VTGSMAQYIP LLEFYGGGLP LISSWYGSSE CFMGVNVNPL CKPSDVSYTI IPSMAYFEFL 360
  361 EVKKDQQEAG LDPIENHVVV DLVDVKIGHD YEPVVTTFSG LYRYRVGDLL RVTGFYNNSP 420
  421 HFRFVGRQKV VLSLHMANTY EEDLLKAVTN AKLLLEPHDL MLMEFTSRVD SSSFVGHYVL 480
  481 YWELGSKVKD AKLEPNRDVM EECCFTVEKY LDPLYRQERR KDKNIGPLEI KVVKPGAFDE 540
  541 LMNFFLSRGS SVSQYKTPRS VKTEEAVKIL EANVVSEFLS QETPPWG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.85
Match: 1md9A
Description: Dihydroxybenzoate-AMP ligase DhbE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.927181813624701 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle