YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: TAR4_ARATH
Organism: Arabidopsis thaliana
Length: 463 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TAR4_ARATH.

Description E-value Query
Range
Subject
Range
AAT_AQUAE - Aspartate aminotransferase OS=Aquifex aeolicus (strain VF5) GN=aspC PE=3 SV=1
AAT_AQUAE - Aspartate aminotransferase OS=Aquifex aeolicus GN=aspC PE=3 SV=1
335.0 [0..60] [451..4]

Back

Predicted Domain #1
Region A:
Residues: [1-463]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMQKKLLLIV SIILNLVFTI HILYYSSTTW NPTWTNRAAA EAETVASFSC SGHGRAFVDG  60
   61 LGVLDGQKPP CECNNCYIGK DCSVLLKDCP VDANSGDPLF LEPFWMRQAE RSAILVSGWH 120
  121 RMSYIYEDGT YVSRELEKVI RKLHSVVGNA VTDNRFVIFG SGTTQLLAAA VHALSLTNSS 180
  181 VSSPARLLTS IPYYAMYKDQ AEFFDSAHLK FEGNASAWKQ SGRNDNITQV IEVVTSPNNP 240
  241 DGKLKRAVLD GPNVKTLHDY AYYWPHFSPI THPVDEDLSL FSLSKTTGHA GSRFGWGLVK 300
  301 DKAIYEKMDR FIRLTSMGVS KETQLHVLQL LKVVVGDGGN EIFSFGYGTV KKRWETLNKI 360
  361 FSMSTRFSLQ TIKPEYCNYF KKVREFTPSY AWVKCERPED TNCYEIFRAA KITGRNGNVF 420
  421 GSEERFVRLS LIRSQDDFDQ LIAMLKKLVY HEEDVPSENF MYI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.045757
Match: 1lk9A
Description: Alliinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.76873005093488 bayes_pls_golite062009
transferase activity 0.3093369052482 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle