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View Structure Prediction Details

Protein: B3GT5_ARATH
Organism: Arabidopsis thaliana
Length: 398 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for B3GT5_ARATH.

Description E-value Query
Range
Subject
Range
gi|125582562, gi... - gi|50909623|ref|XP_466300.1| putative avr9 elicitor response protein [Oryza sativa (japonica cultiva...
gi|125539950 - gi|125539950|gb|EAY86345.1| hypothetical protein OsI_07722 [Oryza sativa Indica Group]
337.0 [0..1] [394..3]

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Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHNNKVSKR LTMTWVPLLC ISCFFLGAIF TSKLRSASSD SGSQLILQHR RDQELKIVTQ  60
   61 DYAHEKKKSQ DNDVMEEVLK THKAIESLDK SVSMLQKQLS ATHSPQQIVN VSATNS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [117-398]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STEGNQKNKV FMVIGINTAF SSRKRRDSLR ETWMPQGEKL EKLEKEKGIV VKFMIGHSST  60
   61 PNSMLDKEID SEDAQYNDFF RLDHVEGYYN LSAKTKSFFS SAVAKWDAEF YVKIDDDVHV 120
  121 NLGTLASTLA SHRSKPRVYI GCMKSGPVLT KKTAKYREPE FWKFGEEGNK YFRHATGQIY 180
  181 AISKDLATYI SNNQPILHKY ANEDVTLGSW FIGLEVEQID DRNFCCGTPP DCEMRAEAGE 240
  241 MCVATFDWKC SGVCRSVDRM WMVHVMCGEG SKAVWDANLK LS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.39794
Match: 2j0aA
Description: No description for 2j0aA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle