YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: GDL31_ARATH
Organism: Arabidopsis thaliana
Length: 366 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL31_ARATH.

Description E-value Query
Range
Subject
Range
gi|110736208 - gi|110736208|dbj|BAF00075.1| putative lipase/acylhydrolase [Arabidopsis thaliana]
331.0 [0..7] [366..1]

Back

Predicted Domain #1
Region A:
Residues: [1-366]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFCAIFVLF IVLAINGYDC KIVQFIFGDS LSDVGNNKNL PRSLATANLP FYGIDFGNGL  60
   61 PNGRFTNGRT VSDIIGDKIG LPRPVAFLDP SMNEDVILEN GVNYASGGGG ILNETGGYFI 120
  121 QRFSLWKQIE LFQGTQDVVV AKIGKKEADK FFQDARYVVA LGSNDFINNY LMPVYSDSWK 180
  181 YNDQTFVDYL METLESQLKV LHSLGARKLM VFGLGPMGCI PLQRALSLDG NCQNKASNLA 240
  241 KRFNKAATTM LLDLETKLPN ASYRFGEAYD LVNDVITNPK KYGFDNSDSP CCSFYRIRPA 300
  301 LTCIPASTLC KDRSKYVFWD EYHPTDKANE LVANILIKRF DFMRADDGIS HAPSPAPDIS 360
  361 PSSDNN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.19
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.471286748048633 bayes_pls_golite062009
catalytic activity 0.319044203629006 bayes_pls_golite062009
protein binding 0.0277911089352154 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle