| Protein: | gi|51971929, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 688 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|51971929, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
396.0 | [0..1] | [686..452] |
|
Region A: Residues: [1-211] |
1 11 21 31 41 51
| | | | | |
1 MVTLCATLLI LLSIFLATPS NVRGNAELKA LMELKSSLDP ENKLLRSWTF NGDPCDGSFE 60
61 GIACNQHLKV ANISLQGKRL VGKLSPAVAE LKCLSGLYLH YNSLSGEIPQ EITNLTELSD 120
121 LYLNVNNFSG EIPADIGSMA GLQVMDLCCN SLTGKIPKNI GSLKKLNVLS LQHNKLTGEV 180
181 PWTLGNLSML SRLDLSFNNL LGLIPKTLAN I
|
| Detection Method: |  |
| Confidence: | 17.522879 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [212-294] |
1 11 21 31 41 51
| | | | | |
1 PQLDTLDLRN NTLSGFVPPG LKKLNGSFQF ENNTGLCGID FPSLRACSAF DNANNIEQFK 60
61 QPPGEIDTDK SALHNIPESV YLQ
|
| Detection Method: | |
| Confidence: | 2.13 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [295-380] |
1 11 21 31 41 51
| | | | | |
1 KHCNQTHCKK SSSKLPQVAL ISSVITVTIT LIGAGILTFF RYRRRKQKIS NTPEFSEGRL 60
61 STDQQKEFRA SPLVSLAYTK EWDPLG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [381-688] |
1 11 21 31 41 51
| | | | | |
1 DSRNGAEFSQ EPHLFVVNSS FRFNLEDIES ATQCFSEANL LSRNSFTSVF KGVLRDGSPV 60
61 AIRSINISSC KNEEVEFMNG LKLLSSLSHE NLVKLRGFCC SRGRGECFLI YDFASKGKLS 120
121 NFLDLQERET NLVLAWSARI SIIKGIAKGI AYLHGSDQQK KPTIVHRNIS VEKILLDEQF 180
181 NPLIADSGLH NLLADDMVFS ALKTSAAMGY LAPEYVTTGK FTEKTDIFAF GVIILQILSG 240
241 KLMLTSSLRN AAENGEHNGF IDEDLREEFD KPEATAMARI GISCTQEIPN NRPNIETLLE 300
301 NINCMKSE
|
| Detection Method: | |
| Confidence: | 62.221849 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
