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View Structure Prediction Details

Protein: gi|15240832, gi|...
Organism: Arabidopsis thaliana
Length: 401 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15240832, gi|....

Description E-value Query
Range
Subject
Range
gi|38260690 - gi|38260690|gb|AAR15504.1| nuclear division RFT1-like protein [Arabidopsis arenosa]
500.0 [0..8] [401..35]

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Predicted Domain #1
Region A:
Residues: [1-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFALIPDGP ESEENVTRIL KVAWVTVPLG IAITIAACIF VLWWQNLSYS DPYAQAIWIH  60
   61 GFACVLELMA EPLYILSQTL LKLQLRLIVE TVATLARCVT LYSLLVMQTN MEKVIIFALS 120
  121 QVAYGGSLFI GYWAYFLICG VYRSSNLFPF RPGNF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [156-401]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFDNDLSKM CKLFTFQSFR KLILQEVLKT PGSLVVRMVF LPFEESSYTI FARFASGDYQ  60
   61 ERNKKLGIYL TVALKLVILI GLIFMAFGPS YSYSLIRLLY GEKWSDGEAS LALQFYCLYI 120
  121 IVLAMNGTSE AFLHAVGTKN ELERSNDMLL IFSLIYVALN ILLIRSAGAI GLIMANSLSW 180
  181 QILILSSIIT LISEKTILDR KNFWETFPLH FGIGVICFCL SAIVIYRRER VFIKRIKRFR 240
  241 DYNHDD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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