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View Structure Prediction Details

Protein: PDCT1_ARATH
Organism: Arabidopsis thaliana
Length: 301 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PDCT1_ARATH.

Description E-value Query
Range
Subject
Range
PDCT2_ARATH - Phosphatidylcholine:diacylglycerol cholinephosphotransferase 2 OS=Arabidopsis thaliana GN=At3g15830 ...
465.0 [0..1] [300..1]

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Predicted Domain #1
Region A:
Residues: [1-301]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAAAAETDV SLRRRSNSLN GNHTNGVAID GTLDNNNRRV GDTNTHMDIS AKKTDNGYAN  60
   61 GVGGGGWRSK ASFTTWTARD IVYVVRYHWI PCMFAAGLLF FMGVEYTLQM IPARSEPFDL 120
  121 GFVVTRSLNR VLASSPDLNT VLAALNTVFV GMQTTYIVWT WLVEGRARAT IAALFMFTCR 180
  181 GILGYSTQLP LPQDFLGSGV DFPVGNVSFF LFFSGHVAGS MIASLDMRRM QRLRLAMVFD 240
  241 ILNVLQSIRL LGTRGHYTID LAVGVGAGIL FDSLAGKYEE MMSKRHLGTG FSLISKDSLV 300
  301 N

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.98
Match: 2a96A
Description: No description for 2a96A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle