| Protein: | EF109_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 268 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EF109_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
205.0 | [0..19] | [251..197] |
|
Region A: Residues: [1-129] |
1 11 21 31 41 51
| | | | | |
1 MHYPNNRTEF VGAPAPTRYQ KEQLSPEQEL SVIVSALQHV ISGENETAPC QGFSSDSTVI 60
61 SAGMPRLDSD TCQVCRIEGC LGCNYFFAPN QRIEKNHQQE EEITSSSNRR RESSPVAKKA 120
121 EGGGKIRKR
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.372 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.356 | N/A | N/A | a.17.1 | p8-MTCP1 |
| View | Download | 0.354 | N/A | N/A | a.17.1 | p8-MTCP1 |
| View | Download | 0.349 | N/A | N/A | a.4.12 | TrpR-like |
| View | Download | 0.322 | N/A | N/A | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
|
Region A: Residues: [130-268] |
1 11 21 31 41 51
| | | | | |
1 KNKKNGYRGV RQRPWGKFAA EIRDPKRATR VWLGTFETAE DAARAYDRAA IGFRGPRAKL 60
61 NFPFVDYTSS VSSPVAADDI GAKASASASV SATDSVEAEQ WNGGGGDCNM EEWMNMMMMM 120
121 DFGNGDSSDS GNTIADMFQ
|
| Detection Method: | |
| Confidence: | 22.0 |
| Match: | 2gccA |
| Description: | SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.339357445627225 | bayes_pls_golite062009 |
