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View Structure Prediction Details

Protein: ISAM2_ARATH
Organism: Arabidopsis thaliana
Length: 158 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ISAM2_ARATH.

Description E-value Query
Range
Subject
Range
gi|62651064, gi|... - gi|62651064|ref|XP_576075.1| PREDICTED: similar to HESB like domain containing 1 [Rattus norvegicus]...
176.0 [0..2] [158..4]

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Predicted Domain #1
Region A:
Residues: [1-158]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRSLVKRVA PYLAGRIREN HRLLNFSSAS AIKEASSSSS SQPESSSNDV VHLSDNCIRR  60
   61 MKELQSSEPE KKMLRLGVET GGCSGFQYKF ELDNRTNPDD RVFEKNGVKL VVDNVSYDLV 120
  121 KGATIDYEEE LIRAAFVVAV NPSAVGGCSC KSSFMVKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.522879
Match: 1s98A
Description: E.coli IscA crystal structure to 2.3 A
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
2 iron, 2 sulfur cluster binding 1.80248983815833 bayes_pls_golite062009
iron-sulfur cluster binding 1.47577968990921 bayes_pls_golite062009
metal cluster binding 1.47577968990921 bayes_pls_golite062009
binding 0.0602586837339399 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle