| Protein: | gi|15228863, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 472 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15228863, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
628.0 | [0..1] | [469..1] |
|
|
512.0 | [0..6] | [472..14] |
|
|
437.0 | [0..62] | [468..72] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MEKPVFAPWR SDQVFRPPET PLEPMEFLSR SWSVSAHEVS KALTPSQQLL SKASIENTTV 60
61 ILEEPIAAGE TETEDNSFVS GNPFSFACSE TSQMVMDRIL SQS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.560 | a.60.14 | Description not found. |
| View | Download | 0.505 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.473 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.375 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.349 | a.219.1 | Description not found. |
| View | Download | 0.278 | d.141.1 | Ribosomal protein L6 |
| View | Download | 0.271 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.263 | c.78.2 | Aspartate/glutamate racemase |
| View | Download | 0.241 | d.54.1 | Enolase N-terminal domain-like |
|
Region A: Residues: [104-286] |
1 11 21 31 41 51
| | | | | |
1 QEVSPRTSGR LSHSSGPLNG SLTDSPPISP HQVDDIKQFC RSNNNFNSQY RSTGTTPGPI 60
61 TATTTQSKTV GRWLKDRREK KKEEMRAHNA QIHAAVSVAG VAAAVAAIAA ATAASSSAGK 120
121 DENMAKTDMA VASAATLVAA QCVEAAEVMG AERDHLASVV SSAVNVRSAG DIMTLTAGAA 180
181 TAL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [287-353] |
1 11 21 31 41 51
| | | | | |
1 RGVATLKARA MKEVWHIASV IPMDKGINLG GCSNVNGNGS YVSSSSSHSG EFLVEDNFLG 60
61 HCNREWL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.530 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.479 | a.217.1 | Description not found. |
| View | Download | 0.418 | a.112.1 | Description not found. |
| View | Download | 0.418 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.363 | a.159.5 | Description not found. |
| View | Download | 0.326 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.313 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.311 | a.4.1 | Homeodomain-like |
| View | Download | 0.266 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.208 | a.159.4 | Description not found. |
|
Region A: Residues: [354-472] |
1 11 21 31 41 51
| | | | | |
1 ARGGQLLKRT RKGDLHWKIV SVYINRLNQV ILKMKSRHVG GTFTKKNKNV VIDVIKNVQA 60
61 WPGRHLLEGG EDLRYFGLKT VPRGIVEFQC KSQREYEMWT QGVSRLIAVA AERNNRYRI
|
| Detection Method: | |
| Confidence: | 68.167491 |
| Match: | PF08458.1 |
| Description: | No description for PF08458.1 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.713 | N/A | N/A | d.129.2 | Phosphoglucomutase, C-terminal domain |
| View | Download | 0.678 | N/A | N/A | d.58.13 | Anticodon-binding domain of PheRS |
| View | Download | 0.678 | N/A | N/A | d.58.13 | Anticodon-binding domain of PheRS |
| View | Download | 0.666 | N/A | N/A | d.74.1 | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
| View | Download | 0.650 | N/A | N/A | d.110.4 | SNARE-like |
| View | Download | 0.609 | N/A | N/A | d.322.1 | Description not found. |
| View | Download | 0.608 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.603 | N/A | N/A | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.600 | N/A | N/A | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
