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View Structure Prediction Details

Protein: RLF24_ARATH
Organism: Arabidopsis thaliana
Length: 118 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RLF24_ARATH.

Description E-value Query
Range
Subject
Range
gi|21553907 - gi|21553907|gb|AAM62990.1| unknown [Arabidopsis thaliana]
156.0 [0..1] [118..1]

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Predicted Domain #1
Region A:
Residues: [1-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRSLALVYL SLLCLQTHLS ISVTVPIPSV NGEIDAMLNR NGVIGEEEGE EMMPSEISRR  60
   61 VMMMRKQYIS YETLRRDMVP CQKPGASYYA CRSGQANAYN RGCSVITRCA RDTNDIKT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 36.251812
Match: PF05498.2
Description: No description for PF05498.2 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.333 N/A N/A a.35.1 lambda repressor-like DNA-binding domains
View Download 0.329 N/A N/A a.66.1 Transducin (alpha subunit), insertion domain
View Download 0.308 N/A N/A a.77.1 DEATH domain
View Download 0.298 N/A N/A a.60.11 Hypothetical protein YjbJ
View Download 0.237 N/A N/A a.24.17 Group V grass pollen allergen


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle