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View Structure Prediction Details

Protein: gi|5882739, gi|4...
Organism: Arabidopsis thaliana
Length: 265 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|5882739, gi|4....

Description E-value Query
Range
Subject
Range
gi|24850307 - gi|24850307|gb|AAN63154.1| transcription factor MYBS3 [Oryza sativa (japonica cultivar-group)]
238.0 [0..3] [241..6]

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Predicted Domain #1
Region A:
Residues: [1-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADGSTSSSE STTACAGSGT RREIMLFGVR VVLDPMRKCV SLNNLSDYEQ TAETPKIDGE  60
   61 DRDEQDMNKT PAGYASADEA LPMSSSNGKI ERKRGVPWTE EEHKLFLLGL QRVGKGDWKG 120
  121 ISRNFVKTRT STQVASHAQK YFLRRSNLNR RRRRSSLFDM TTDTVIPMEE DHQVLIQENT 180
  181 SQSSSPVPEI NNFSIHPVMQ VFPEFPVPTG NQSYGQLTSS NLINLVPLTF QSSPAPLSLN 240
  241 LSLASSNLNE PSPSMHPAFN TIGVA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.522879
Match: 2v1dB
Description: No description for 2v1dB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle