| Protein: | gi|15227541, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 1805 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15227541, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
479.0 | [0..400] | [1440..1777] |
|
Region A: Residues: [1-138] |
1 11 21 31 41 51
| | | | | |
1 MYSSSSSSSI FLQFPPARIT TASPFILRRS RKRGARFKRQ SRNLVLVNSS IFPPPFDGSV 60
61 PLDSSLAPSL AGIASGLAVY LSSRFFGKSL EKISDKIVDD VVVGEWILFT TPTPFNRFVL 120
121 LRCSLLSFDD DSEKSLSD
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [139-444] |
1 11 21 31 41 51
| | | | | |
1 RLVTEERHFV TLDSGKIVRD GAVTDEKTPL EYQRVCITME DGGVVSLDWP ANLDIREERG 60
61 LDTTVVFIPG TPEGSMEEGV RSFVCEALRR GVFPVVMNPR GCAGSPLTTP RLFTAGDSDD 120
121 ISTALRFLSK TRPWTTLTAV GRGYGANMLT KYLAEAGERT PLTAAVCIDN PFDLEEITRT 180
181 SPYSTSLDQQ LTRGLVEILL ANKELFQGRA KAFDVGKALC SKSVREFDKA LSMVTYGCES 240
241 IEDFYSSCAT REVIGEVKVP LLFIQNDDVV PPYTIPRSSI AENPFTSLLL CSSSPNLIDG 300
301 RTVAVS
|
| Detection Method: | |
| Confidence: | 33.69897 |
| Match: | 1zoiA |
| Description: | No description for 1zoiA was found. |
|
Region A: Residues: [445-567] |
1 11 21 31 41 51
| | | | | |
1 WCQDLAKIDF PMLAMQWLTA VELGLLKGRH PLLEDVDVTV NPSKGLVFSE ARAPEKSIGA 60
61 KKLVQAAHEK TVNGYHLDPF RETLEDSDMT PNSNLSPETD LEKNVKIDYG SDETENNIVS 120
121 TRV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.516 | d.58.12 | eEF-1beta-like |
| View | Download | 0.462 | d.58.42 | N-utilization substance G protein NusG, N-terminal domain |
| View | Download | 0.372 | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.315 | d.58.43 | Mechanosensitive channel protein MscS (YggB), C-terminal domain |
| View | Download | 0.309 | a.118.8 | TPR-like |
|
Region A: Residues: [568-784] |
1 11 21 31 41 51
| | | | | |
1 ESIEDNESNV EESDRGQVLQ TAEVVVSMLD VTMPGTLKAE EKKKVMDAVG RGETVLTALQ 60
61 DAVPEDVREK LTTAVTGILQ SGGTKLNLEN LKLPSIAPGL KKAEEEKKET SSAIGQSDSY 120
121 SPDPKDKSDG LVSGSDETIS GSDNSPGGVE LEHSPSKVSQ RNSDSGKSQP VDNDQDDSPG 180
181 NHESHTNEKT SAADDSEMAS EAKSDSANQG PIGAEAV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [785-861] |
1 11 21 31 41 51
| | | | | |
1 TNNDDKVEQG SGVATHQGQV ETSKNDEKGA PIANEKSSVA DGFEKASDAK NDSTNPQPVG 60
61 ADDITSDGDK VDQGVVL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [862-930] |
1 11 21 31 41 51
| | | | | |
1 AQQQRKDETS KSDENAKQSA TDQNKVTSTD NEGDAGKSSA SQPVEKDESN DQSKETKVMQ 60
61 PVSDQTKPA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [931-1305] |
1 11 21 31 41 51
| | | | | |
1 IQEPNQPNFN VSQAFEALTG MDDSTQVAVN SVFGVLENMI SQLDEEKKEG NEVSDEKNLK 60
61 DEKNLKDAKN VTNEVVSPSE EEIPYKRETK SLMPSAKSRD PACSVSETEK CSDNDKVTGV 120
121 VIEKQLGRDE FVIGKHSPKI LPERKTDSIE NSSHDGYLGE ELSKEKIAKQ LDLDTTTALM 180
181 LDYYPEEGKW KLLDQQPKRL DDDYYPEEGK WKLLDQQPEY LGNVADNAAA SRNTHDNVQV 240
241 HSLSVDNEET IEPSYVIVDH EQELELSGMH DAADNQNDGP HKLDEGCEEL EHLINVIVSD 300
301 SLNVEIQRRM GSAGMRQIES QLSRDIKKVA KTFSYAVVYS EPTWTFKRNS KTSNVPAGKV 360
361 GKLRGDAIIR AIASA
|
| Detection Method: | |
| Confidence: | 16.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1306-1438] |
1 11 21 31 41 51
| | | | | |
1 VQEAHFLRQV LPIGVVVGSV LAALRKYFDV STTTNNAKRD VVPGRRQKYE NNGAMASVLP 60
61 DKVSKETKQN NSSIGEMVES GLQSINNKSA MVGAVTAALG ASAMLVQHED PQRGGIMSKS 120
121 SDKDSQQKES GQL
|
| Detection Method: | |
| Confidence: | 3.522879 |
| Match: | 2dfsA |
| Description: | No description for 2dfsA was found. |
|
Region A: Residues: [1439-1516] |
1 11 21 31 41 51
| | | | | |
1 DQSSMVGSFA EKAMSIAGPA VPTKETGEVD QDRIVAMLAD LGQRGGILSL VGKLALLWGG 60
61 LRGAMSLTDR LIQFLHMD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1517-1696] |
1 11 21 31 41 51
| | | | | |
1 EWPLLKRAVG FIGMVLVLWS PVVIPLLPTL LQNWSTSNPS RVAELASVVG LYVAVFILVM 60
61 LWGKRVRKYE NPFKQYGLDL KASNKEKIQE FLKAFAGGIT VVLLIQFINA ISGAAFLSRP 120
121 PYFPHSFDAM KWLKGCGQFL LLIIRGFTAA TFVVLVEELL FRSWMPAEIA IDLGYHQSII 180
181
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1697-1805] |
1 11 21 31 41 51
| | | | | |
1 ITGLIFALFQ RSLRSIPGFW LLSLALTWAR ERSQGNLIVP IGLRAGIIAS SFILQSGGFL 60
61 TYNPSSPVWI AGSRPSQPFS GVVGLMVSLA LALILYPKRS PETKMQKYN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
