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View Structure Prediction Details

Protein: gi|222424480, gi...
Organism: Arabidopsis thaliana
Length: 252 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|222424480, gi....

Description E-value Query
Range
Subject
Range
gi|3328221 - gi|3328221|gb|AAC78473.1| thioredoxin peroxidase [Secale cereale]
199.0 [0..1] [252..1]

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Predicted Domain #1
Region A:
Residues: [1-252]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASTVVTTV THGASSILPS RTALAVSSRR FSSFSPSRLD FSNLRRRVNA PSPRRLVVRA  60
   61 ARTESAGVKL GARAPNFELP EPLTGNLWKL EDFELYPSLL VMFICNHCPF VIHLKKDIVK 120
  121 LCNFYMKKGL AVVAISSNSV VTHPQDGPEF MAEDAKVFKY PFPYLYDESQ EVAREFGAVC 180
  181 TPEFFLYKKD GRRPFELVYH GQFDDSRPSS NSPVTGRDLS LAIDLSLSCQ PIPSNQKPSV 240
  241 GCSIKWHPET KS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.09691
Match: 2cvbA
Description: Crystal structure of a thioredoxin-like protein from Thermus thermophilus HB8
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle