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View Structure Prediction Details

Protein: JAL33_ARATH
Organism: Arabidopsis thaliana
Length: 300 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for JAL33_ARATH.

Description E-value Query
Range
Subject
Range
JAL32_ARATH - Jacalin-related lectin 32 OS=Arabidopsis thaliana GN=JAL32 PE=2 SV=1
342.0 [0..1] [300..1]

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Predicted Domain #1
Region A:
Residues: [1-300]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQKVEAGGG AGGASWDDGV HDGVRKVHVG QGQDGVSSIN VVYAKDSQDV EGGEHGKKTL  60
   61 LGFETFEVDA DDYIVAVQVT YDNVFGQDSD IITSITFNTF KGKTSPPYGL ETQKKFVLKD 120
  121 KNGGKLVGFH GRAGEALYAL GAYFATTTTP VTPAKKLSAI GGDEGTAWDD GAYDGVKKVY 180
  181 VGQGQDGISA VKFEYNKGAE NIVGGEHGKP TLLGFEEFEI DYPSEYITAV EGTYDKIFGS 240
  241 DGLIITMLRF KTNKQTSAPF GLEAGTAFEL KEEGHKIVGF HGKASELLHQ FGVHVMPLTN 300
  301 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.09691
Match: 1zgrA
Description: Crystal structure of the Parkia platycephala seed lectin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle