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View Structure Prediction Details

Protein: GDL36_ARATH
Organism: Arabidopsis thaliana
Length: 349 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL36_ARATH.

Description E-value Query
Range
Subject
Range
GDL15_ARATH - GDSL esterase/lipase At1g29670 OS=Arabidopsis thaliana GN=At1g29670 PE=2 SV=1
306.0 [0..1] [349..1]

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Predicted Domain #1
Region A:
Residues: [1-349]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEAIFKALL LVIATTAFAT TEAALGQRVP CYFVFGDSVF DNGNNNVLNT SAKVNYSPYG  60
   61 IDFARGPTGR FSNGRNIPDI IAELMRFSDY IPPFTGASPE QAHIGINYAS GGGGIREETS 120
  121 QHLGEIISFK KQIKNHRSMI MTAKVPEEKL NKCLYTINIG SNDYLNNYFM PAPYMTNKKF 180
  181 SFDEYADSLI RSYRSYLKSL YVLGARKVAV FGVSKLGCTP RMIASHGGGN GCAAEVNKAV 240
  241 EPFNKNLKAL VYEFNRDFAD AKFTFVDIFS GQSPFAFFML GFRVTDKSCC TVKPGEELCA 300
  301 TNEPVCPVQR RYVYWDNVHS TEAANMVVAK AAYAGLITSP YSLSWLARL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.32
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.471286748048633 bayes_pls_golite062009
catalytic activity 0.319044203629006 bayes_pls_golite062009
protein binding 0.0277911089352154 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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