| Protein: | CMT1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 791 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CMT1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
584.0 | [0..1] | [791..1] |
|
Region A: Residues: [1-59] |
1 11 21 31 41 51
| | | | | |
1 MAARNKQKKR AEPESDLCFA GKPMSVVEST IRWPHRYQSK KTKLQAPTKK PANKGGKKE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [60-207] |
1 11 21 31 41 51
| | | | | |
1 DEEIIKQAKC HFDKALVDGV LINLNDDVYV TGLPGKLKFI AKVIELFEAD DGVPYCRFRW 60
61 YYRPEDTLIE RFSHLVQPKR VFLSNDENDN PLTCIWSKVN IAKVPLPKIT SRIEQRVIPP 120
121 CDYYYDMKYE VPYLNFTSAD DGSDASSS
|
| Detection Method: | |
| Confidence: | 28.39794 |
| Match: | 1w4sA |
| Description: | Crystal structure of the proximal BAH domain of polybromo |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [208-353] |
1 11 21 31 41 51
| | | | | |
1 LSSDSALNCF ENLHKDEKFL LDLYSGCGAM STGFCMGASI SGVKLITKWS VDINKFACDS 60
61 LKLNHPETEV RNEAAEDFLA LLKEWKRLCE KFSLVSSTEP VESISELEDE EVEENDDIDE 120
121 ASTGAELEPG EFEVEKFLGI MFGDPQ
|
| Detection Method: | |
| Confidence: | 4.99 |
| Match: | 1dctA |
| Description: | DNA methylase HaeIII |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [354-791] |
1 11 21 31 41 51
| | | | | |
1 GTGEKTLQLM VRWKGYNSSY DTWEPYSGLG NCKEKLKEYV IDGFKSHLLP LPGTVYTVCG 60
61 GPPCQGISGY NRYRNNEAPL EDQKNQQLLV FLDIIDFLKP NYVLMENVVD LLRFSKGFLA 120
121 RHAVASFVAM NYQTRLGMMA AGSYGLPQLR NRVFLWAAQP SEKLPPYPLP THEVAKKFNT 180
181 PKEFKDLQVG RIQMEFLKLD NALTLADAIS DLPPVTNYVA NDVMDYNDAA PKTEFENFIS 240
241 LKRSETLLPA FGGDPTRRLF DHQPLVLGDD DLERVSYIPK QKGANYRDMP GVLVHNNKAE 300
301 INPRFRAKLK SGKNVVPAYA ISFIKGKSKK PFGRLWGDEI VNTVVTRAEP HNQCVIHPMQ 360
361 NRVLSVRENA RLQGFPDCYK LCGTIKEKYI QVGNAVAVPV GVALGYAFGM ASQGLTDDEP 420
421 VIKLPFKYPE CMQAKDQI
|
| Detection Method: | |
| Confidence: | 42.0 |
| Match: | 1g55A |
| Description: | DNMT2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA-methyltransferase activity | 3.31632172292823 | bayes_pls_golite062009 |
| transferase activity | 2.42370637689376 | bayes_pls_golite062009 |
| methyltransferase activity | 2.24556320310886 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 2.1789895493932 | bayes_pls_golite062009 |
| site-specific DNA-methyltransferase (adenine-specific) activity | 2.17404404470337 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 2.06810685308813 | bayes_pls_golite062009 |
| catalytic activity | 1.62377578202456 | bayes_pls_golite062009 |
| RNA methyltransferase activity | 1.36067005317038 | bayes_pls_golite062009 |
| rRNA methyltransferase activity | 0.740099749645209 | bayes_pls_golite062009 |
| DNA (cytosine-5-)-methyltransferase activity | 0.6110460718981 | bayes_pls_golite062009 |
| N-methyltransferase activity | 0.49575399394607 | bayes_pls_golite062009 |
| histone methyltransferase activity (H4-R3 specific) | 0.0680860762896796 | bayes_pls_golite062009 |
