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View Structure Prediction Details

Protein: ZEP_ARATH
Organism: Arabidopsis thaliana
Length: 667 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ZEP_ARATH.

Description E-value Query
Range
Subject
Range
gi|9049490, gi|9... - gi|9049490|gb|AAF82391.1|AF134578_1 zeaxanthin epoxidase [Arabidopsis thaliana], gi|9049488|gb|AAF82...
439.0 [0..1] [667..1]

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Predicted Domain #1
Region A:
Residues: [1-75]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSTPFCYSI NPSPSKLDFT RTHVFSPVSK QFYLDLSSFS GKPGGVSGFR SRRALLGVKA  60
   61 ATALVEKEEK REAVT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.39794
Match: 2bryA
Description: Crystal structure of the native monooxygenase domain of MICAL at 1.45 A resolution
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [76-569]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKKKKSRVLV AGGGIGGLVF ALAAKKKGFD VLVFEKDLSA IRGEGKYRGP IQIQSNALAA  60
   61 LEAIDIEVAE QVMEAGCITG DRINGLVDGI SGTWYVKFDT FTPAASRGLP VTRVISRMTL 120
  121 QQILARAVGE DVIRNESNVV DFEDSGDKVT VVLENGQRYE GDLLVGADGI WSKVRNNLFG 180
  181 RSEATYSGYT CYTGIADFIP ADIESVGYRV FLGHKQYFVS SDVGGGKMQW YAFHEEPAGG 240
  241 ADAPNGMKKR LFEIFDGWCD NVLDLLHATE EEAILRRDIY DRSPGFTWGK GRVTLLGDSI 300
  301 HAMQPNMGQG GCMAIEDSFQ LALELDEAWK QSVETTTPVD VVSSLKRYEE SRRLRVAIIH 360
  361 AMARMAAIMA STYKAYLGVG LGPLSFLTKF RVPHPGRVGG RFFVDIAMPS MLDWVLGGNS 420
  421 EKLQGRPPSC RLTDKADDRL REWFEDDDAL ERTIKGEWYL IPHGDDCCVS ETLCLTKDED 480
  481 QPCIVGSEPD QDFP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.221849
Match: 2dkhA
Description: No description for 2dkhA was found.

Predicted Domain #3
Region A:
Residues: [570-667]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GMRIVIPSSQ VSKMHARVIY KDGAFFLMDL RSEHGTYVTD NEGRRYRATP NFPARFRSSD  60
   61 IIEFGSDKKA AFRVKVIRKT PKSTRKNESN NDKLLQTA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.154902
Match: 2affA
Description: The solution structure of the Ki67FHA/hNIFK(226-269)3P complex
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle