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View Structure Prediction Details

Protein: gi|11260179, gi|...
Organism: Arabidopsis thaliana
Length: 370 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11260179, gi|....

Description E-value Query
Range
Subject
Range
gi|241666404, gi... - gi|62655257|ref|XP_244186.3| PREDICTED: similar to Eph receptor A4 [Rattus norvegicus], gi|241666404...
279.0 [0..7] [369..592]

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Predicted Domain #1
Region A:
Residues: [1-370]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISRMIFRNY PSHNESDDEP FHFSISRELL LDRNDVVVGE MIGEGAYSIV YKGLLRNQFP  60
   61 VAVKIMDPST TSAVTKAHKK TFQKEVLLLS KMKHDNIVKF VGACIEPQLI IVTELVEGGT 120
  121 LQRFMHSRPG PLDLKMSLSF ALDISRAMEF VHSNGIIHRD LNPRNLLVTG DLKHVKLADF 180
  181 GIAREETRGG MTCEAGTSKW MAPEVYSPEP LRVGEKKEYD HKADIYSFAI VLWQLVTNEE 240
  241 PFPDVPNSLF VPYLVSQGRR PILTKTPDVF VPIVESCWAQ DPDARPEFKE ISVMLTNLLR 300
  301 RMSSDSSIGT TLPDGEAYEG EMEESENSPL LQEHFCKVKK PKEKKKKKKL VKMRFPFFKK 360
  361 FKVWLYNYKP 

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Detection Method: PSI-BLAST
Confidence: 70.39794
Match: 2qoqA
Description: No description for 2qoqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle