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View Structure Prediction Details

Protein: gi|7441830, gi|1...
Organism: Arabidopsis thaliana
Length: 429 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7441830, gi|1....

Description E-value Query
Range
Subject
Range
FP1_MYTCO - Adhesive plaque matrix protein OS=Mytilus coruscus GN=FP1 PE=2 SV=1
189.0 [0..4] [429..264]

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Predicted Domain #1
Region A:
Residues: [1-253]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISLRMKGLG HCLVYVVVFS VIAAIVTAYD SPSSTPQYTS PYPPKNYSPY LSESPPPPPP  60
   61 QYRRQEPKYT PHPEPNVYDS PTPLPYYFPF PKLDIKSPPP PSVYTFSPPQ LYYSPSPKVE 120
  121 YKSPPPPYVY SSLPPLTYYS PSPKVIYNSP PPPYIYSSPP PPPYYSPSPK VDYKSPPPPY 180
  181 VYSSPPPPPY YSPSPKVEYK SPPPPYVYSF PPPPPYYSPS PKVGYKSPPA PYVYSSPPPP 240
  241 PYYSPSPKVN YKS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [254-363]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPPPYVYSSP PPPPYSPSPK VEFKSPPPPY IYNSPPPPSY YSPSPKIDYK SPPPPYVYSS  60
   61 PPPPTYYSPS PRVDYKSPPP PYVYNSLPPP YVYNSPPPPP YYSPSPTVNY 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [364-429]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSPPPPYVYN SPPPPPYYSP FPKVEYKSPP PPYIYNSPPP PPYYSPSPKI TYKSPPPPYI  60
   61 YKTPYY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.976
Match: 1q1qA
Description: Crystal structure of human pregnenolone sulfotransferase (SULT2B1a) in the presence of PAP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle