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View Structure Prediction Details

Protein: SYMM_ARATH
Organism: Arabidopsis thaliana
Length: 616 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYMM_ARATH.

Description E-value Query
Range
Subject
Range
SYM_GEOSE - Methionine--tRNA ligase OS=Geobacillus stearothermophilus GN=metG PE=3 SV=1
512.0 [0..66] [614..1]

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Predicted Domain #1
Region A:
Residues: [1-616]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARINTSLH NALSFLKPFN TPLNTKPFSF RRNSFRFSKK LPYYSQFSSG KRALYCTSSS  60
   61 QESTVDEGET FVLTTPLYYV NAPPHMGSAY TTIAADSIAR FQRLLGKKVI FITGTDEHGE 120
  121 KIATSAAANG RNPPEHCDLI SQSYRTLWKD LDIAYDKFIR TTDPKHEAIV KEFYARVFAN 180
  181 GDIYRADYEG LYCVNCEEYK DEKELLENNC CPVHQMPCVA RKEDNYFFAL SKYQKPLEDI 240
  241 LAQNPRFVQP SYRLNEVQSW IKSGLRDFSI SRALVDWGIP VPDDDKQTIY VWFDALLGYI 300
  301 SALTEDNKQQ NLETAVSFGW PASLHLIGKD ILRFHAVYWP AMLMSAGLEL PKMVFGHGFL 360
  361 TKDGMKMGKS LGNTLEPFEL VQKFGPDAVR YFFLREVEFG NDGDYSEDRF IKIVNAHLAN 420
  421 TIGNLLNRTL GLLKKNCEST LVVDSTVAAE GVPLKDTVEK LVEKARTNYE NLSLSSACEA 480
  481 VLEIGNAGNT YMDQRAPWFL FKQGGVSAEE AAKDLVIILE VMRVIAVALS PVAPCLSLRI 540
  541 YSQLGYTEDQ FNSITWSDTK WGGLKGGQVM EQASPVFARI ELNPEKEEDE KKPKVGKKTG 600
  601 KAKVKVVEQT PTVAEA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 117.0
Match: 2csxA
Description: Crystal structure of Aquifex aeolicus methionyl-tRNA synthetase complexed with tRNA(Met)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle