YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|6648181, gi|6...
Organism: Arabidopsis thaliana
Length: 455 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6648181, gi|6....

Description E-value Query
Range
Subject
Range
GPDH2_ARATH - Glycerol-3-phosphate dehydrogenase [NAD(+)] At3g07690, cytosolic OS=Arabidopsis thaliana GN=At3g0769...
365.0 [0..1] [455..2]

Back

Predicted Domain #1
Region A:
Residues: [1-455]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHLVETNSV PSRLVEERLD EIRRVMGKAD DDPLRIVGVG AGAWGSVFIA MLQENYGKFR  60
   61 GKVSVRIWRR GGRAIDKATA EHLFEVINSR EELLRRLIRR CAYLKYVEAR LGDRVLYADE 120
  121 ILKDGFCLNM IETPLCPLKV VTNLQEAVWD ADIVINGLPS TETFQVFNEI SKYWKERVNA 180
  181 PVIISLAKGV EAEFEPHPRI VTPTQMIHRA TGIPLENILY LGGPNIASEV YNKEYANARI 240
  241 CGSEKWRKPL GKFLRQSHFI VWDNSDLITH EVMGGLKNVY AIGAGMVATL TKESATSKSV 300
  301 YFAHCTSEMI FITHLLAKEP EKLAGPLLAD TYVTLLKGRN AWYGQKLAKG ELSLEMGDSI 360
  361 KGKGMIQGVS AVKAFFELLN QSSLSLQHPE EGKPVTPAEL CPILKMLYRI LITREFSCEA 420
  421 ILEALRDETM NDPRELIEIA HSHLFFQPWL LGQKP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 90.69897
Match: 1x0vA
Description: No description for 1x0vA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle