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View Structure Prediction Details

Protein: gi|25408128, gi|...
Organism: Arabidopsis thaliana
Length: 355 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25408128, gi|....

Description E-value Query
Range
Subject
Range
PLA15_ARATH - Phospholipase A1-Igamma1, chloroplastic OS=Arabidopsis thaliana GN=At1g06800 PE=1 SV=2
289.0 [0..4] [346..84]

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Predicted Domain #1
Region A:
Residues: [1-355]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGDIATRWK ELSGSSKWKD LLDPLDLDLR RYILHYGDMA EEIAATPKKS SLLEPVTSKP  60
   61 TLSDEGKKLL GRRGIVVAWR GTIQLYEWAN DFDFPLESAV MVFPGANPND EPRVANGWLS 120
  121 LYTSTDPRSR FDKTSAQEQV QEELKRLLEL YKNEDVTITL TGHSLGAVMS ILSAADFLHN 180
  181 EWPKITPSLQ HSLCVTVFAF GSPQIGDRSF KRLVESLEHL HILRVTNVPD LIPRYPVFRF 240
  241 TDIGEELQIN TLKSEYLKRS LNLGHFHNLE AYLHGVAGTQ HNQGEFKLEI NRDIALVNKG 300
  301 LDALEDKYLV PGHWWVLENK GMVQSDDGTW KLNGDRSKKK QEEEDEKEEN NCKFP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.522879
Match: 1dt3A
Description: Triacylglycerol lipase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.866238607554457 bayes_pls_golite062009
hydrolase activity 0.52702612560045 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle