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View Structure Prediction Details

Protein: CIA2_ARATH
Organism: Arabidopsis thaliana
Length: 435 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CIA2_ARATH.

Description E-value Query
Range
Subject
Range
gi|13937151, gi|... - gi|30696838|ref|NP_851201.1| CIA2 (CHLOROPLAST IMPORT APPARATUS 2); transcription regulator [Arabido...
516.0 [0..1] [419..1]

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Predicted Domain #1
Region A:
Residues: [1-301]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSACLSSGGG GAAAYSFELE KVKSPPPSSS TTTTRATSPS STISESSNSP LAISTRKPRT  60
   61 QRKRPNQTYN EAATLLSTAY PNIFSSNLSS KQKTHSSSNS HFYGPLLSDN DDASDLLLPY 120
  121 ESIEEPDFLF HPTIQTKTEF FSDQKEVNSG GDCYGGEIEK FDFSDEFDAE SILDEDIEEG 180
  181 IDSIMGTVVE SNSNSGIYES RVPGMINRGG RSSSNRIGKL EQMMMINSWN RSSNGFNFPL 240
  241 GLGLRSALRE NDDTKLWKIH TVDFEQISPR IQTVKTETAI STVDEEKSDG KKVVISGEKS 300
  301 N

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [302-435]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKKKKKKMTV TTTLITESKS LEDTEETSLK RTGPLLKLDY DGVLEAWSDK TSPFPDEIQG  60
   61 SEAVDVNARL AQIDLFGDSG MREASVLRYK EKRRTRLFSK KIRYQVRKLN ADQRPRMKGR 120
  121 FVRRPNESTP SGQR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle