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View Structure Prediction Details

Protein: gi|25405232, gi|...
Organism: Arabidopsis thaliana
Length: 351 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25405232, gi|....

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
393.0 [0..3] [349..1361]

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Predicted Domain #1
Region A:
Residues: [1-351]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRSDLTRGY SDGDSLVGEI VREEGHIYSL AATNDLLYTG SDNNYIRVWK NLNEFSGFKS  60
   61 NSGLVKAIVI SREAKVFTGH QDGKIRVWKT SSKNPRVYTR AGSLPALKDV LKSSVKPSNY 120
  121 VEVRRCRTAL WIKHSDAVSC LSLAEDQGLL YSASWDRTVK VWRIHDLKCI ESIKAHDDAV 180
  181 NSVTTAESLV FTGSADGTVK VWKREIRGKR TAHSLFQTLL KQESAVTALV TSHMAVYSGS 240
  241 SDGAVNFWEM GDKKLLKHCE VFKKHRLAVL CIAAAGKLLF SGAADKKICV WRREGKVHTC 300
  301 VSVLTGHTGP VKCLAVVEPS GGEEEDGGDG RLVLYSGSLD KSVKVWRVPR H

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.522879
Match: 2ovpB
Description: No description for 2ovpB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle