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View Structure Prediction Details

Protein: gi|60543349, gi|...
Organism: Arabidopsis thaliana
Length: 390 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|60543349, gi|....

Description E-value Query
Range
Subject
Range
gi|47496868, gi|... - gi|50908051|ref|XP_465514.1| tyrosine-specific protein phosphatase-like [Oryza sativa (japonica cult...
433.0 [0..22] [389..40]

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Predicted Domain #1
Region A:
Residues: [1-186]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFLLMRSLL VHPCGGSIIN VRSTTTSAQY VASRSRDPVF EKLMDKYKNL LKVIAIQDLT  60
   61 LANPTADPPS LSIEFLSRLS QKLHLNRGAA SFLRKYPHIF HVLYDPVKAE PFCRLTDVAM 120
  121 EISRQEALAI TATLSLVVDR LVRLLSMSIS KSIPLRAVFK VWRELGLPDD FEDSVISKNP 180
  181 HLFKLS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [187-390]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGHESNTHIL ELVQEEEKRL EFEAAVEKWR VVECSKEDCS VDRTEIQFSF KHSYPPGMRL  60
   61 SKTFKAKVKE WQRLPYVGPY EDMVGKKKSR SGVMGIEKRA VAIAHEFLNL TVEKMVEVEK 120
  121 ISHFRKCFGI DLNIRDLFLD HPGMFYVSTK GKRHTVFLRE AYERGRLIDP NPVYDARRKL 180
  181 LDLVLLGRHA ALSESGNTSM SEQE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle