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View Structure Prediction Details

Protein: gi|25404133, gi|...
Organism: Arabidopsis thaliana
Length: 166 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25404133, gi|....

Description E-value Query
Range
Subject
Range
gi|4337175, gi|1... - gi|4337175|gb|AAD18096.1| ESTs gb|T20589, gb|T04648, gb|AA597906, gb|T04111, gb|R84180, gb|R65428, g...
201.0 [0..1] [166..1]

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Predicted Domain #1
Region A:
Residues: [1-166]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLVTDEVRA RAEKYTGDEI CREKTKEFLK EVSMPNGLLP LKDIEEVGYD RETGIVWLKQ  60
   61 KKSITHKFEA IGKLVSYATE VIAQVEVGKI KKLTGVKAKE LLIWVTLNEL VLEQPTSSGK 120
  121 INFRTPTGLS RTFPVSAFVV PEVEKPATEK NNGTTEVKEA VAVTDA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.69897
Match: 1yduA
Description: Solution NMR structure of At5g01610, an Arabidopsis thaliana protein containing DUF538 domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle