YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: GDL7_ARATH
Organism: Arabidopsis thaliana
Length: 390 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL7_ARATH.

Description E-value Query
Range
Subject
Range
gi|10764858 - gi|10764858|gb|AAF24548.2|AC007508_11 F1K23.17 [Arabidopsis thaliana]
402.0 [0..1] [390..421]

Back

Predicted Domain #1
Region A:
Residues: [1-390]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYPGSPILM KLLVFIFLST FVVTNVSSET KCREFKSIIS FGDSIADTGN LLGLSDPKDL  60
   61 PHMAFPPYGE NFFHHPTGRF SNGRLIIDFI AEFLGLPLVP PFYGSHNANF EKGVNFAVGG 120
  121 ATALERSFLE DRGIHFPYTN VSLGVQLNSF KESLPSICGS PSDCRDMIEN ALILMGEIGG 180
  181 NDYNYAFFVD KGIEEIKELM PLVITTISSA ITELIGMGGR TFLVPGEFPV GCSVLYLTSH 240
  241 QTSNMEEYDP LTGCLKWLNK FGENHGEQLR AELNRLQKLY PHVNIIYADY YNALFHLYQE 300
  301 PAKFGFMNRP LSACCGAGGP YNYTVGRKCG TDIVESCDDP SKYVAWDGVH MTEAAYRLMA 360
  361 EGILNGPYAI PPFDWSCRSS GVKNSGSSDT 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.18
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.471286748048633 bayes_pls_golite062009
catalytic activity 0.319044203629006 bayes_pls_golite062009
protein binding 0.0277911089352154 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle