| Protein: | gi|3461839, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 786 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|3461839, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
|
464.0 | [0..27] | [786..119] |
|
Region A: Residues: [1-453] |
1 11 21 31 41 51
| | | | | |
1 MMSHLLLAII GTFAVIVGAQ KQEGFISLDC GFPIEESPYS DPSTGLTFTS DSTFIQTGES 60
61 GRVDKELNKI FRKPYLTLRY FPEGKRNCSL RNSFRVHCST SDSEIRYDDD SYDRVWYPFF 120
121 SSSFSYITTS LNINNSDTFE IPKAALKSAA TPKNASAPLI ITWKPRPSNA EVYFYLHFAE 180
181 IQTLAANETR EFDIVFKGNF NYSAFSPTKL ELLTFFTSGP VQCDSDGCNL QLVRTPNSTL 240
241 PPLINALEAY TIIEFPQLET SLSDVNAIKN IKATYRLSKT SWQGDPCLPQ ELSWENLRCS 300
301 YTNSSTPPKI ISLNLSASGL TGSLPSVFQN LTQIQELDLS NNSLTGLVPS FLANIKSLSL 360
361 LDLSGNNFTG SVPQTLLDRE KEGLVLKLEG NPELCKFSSC NPKKKKGLLV PVIASISSVL 420
421 IVIVVVALFF VLRKKKMPSD AQAPPSLPVE DVG
|
| Detection Method: |  |
| Confidence: | 7.0 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [454-786] |
1 11 21 31 41 51
| | | | | |
1 QAKHSESSFV SKKIRFAYFE VQEMTNNFQR VLGEGGFGVV YHGCVNGTQQ VAVKLLSQSS 60
61 SQGYKHFKAE VELLMRVHHK NLVSLVGYCD EGDHLALIYE YMPNGDLKQH LSGKRGGFVL 120
121 SWESRLRVAV DAALGLEYLH TGCKPPMVHR DIKSTNILLD ERFQAKLADF GLSRSFPTEN 180
181 ETHVSTVVAG TPGYLDPEYY QTNWLTEKSD VYSFGIVLLE IITNRPIIQQ SREKPHLVEW 240
241 VGFIVRTGDI GNIVDPNLHG AYDVGSVWKA IELAMSCVNI SSARRPSMSQ VVSDLKECVI 300
301 SENSRTGESR EMNSMSSIEF SMGIDTEVIP KAR
|
| Detection Method: | |
| Confidence: | 62.30103 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
