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View Structure Prediction Details

Protein: gi|7269381, gi|1...
Organism: Arabidopsis thaliana
Length: 356 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7269381, gi|1....

Description E-value Query
Range
Subject
Range
SRG1_ARATH - Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1
336.0 [0..1] [356..1]

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Predicted Domain #1
Region A:
Residues: [1-356]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVKGATRSS IIVPSVQEMV KEKMITTVPP RYVRSDQDVA EIAVDSGLRN QIPIIDMSLL  60
   61 CSSTSMDSEI DKLDSACKEW GFFQLVNHGM ESSFLNKVKS EVQDFFNLPM EEKKNLWQQP 120
  121 DEIEGFGQVF VVSEEQKLDW ADMFFLTMQP VRLRKPHLFP KLPLPFRDTL DMYSAEVKSI 180
  181 AKILLGKIAV ALKIKPEEMD KLFDDELGQR IRLNYYPRCP EPDKVIGLTP HSDSTGLTIL 240
  241 LQANEVEGLQ IKKNAKWVSV KPLPNALVVN VGDILEIITN GTYRSIEHRG VVNSEKERLS 300
  301 VAAFHNIGLG KEIGPMRSLV ERHKAAFFKS VTTEEYFNGL FSRELDGKAY LDVMRL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 84.69897
Match: 1gp4A
Description: Anthocyanidin synthase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.921320409505 bayes_pls_golite062009
binding 0.588242505102319 bayes_pls_golite062009
nucleic acid binding 0.0678642854814351 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle