YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: NAC37_ARATH
Organism: Arabidopsis thaliana
Length: 365 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAC37_ARATH.

Description E-value Query
Range
Subject
Range
NAC76_ARATH - NAC domain-containing protein 76 OS=Arabidopsis thaliana GN=NAC076 PE=1 SV=1
370.0 [0..1] [358..1]

Back

Predicted Domain #1
Region A:
Residues: [1-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPMESCSVP PGFRFHPTDE ELVGYYLRKK IASQKIDLDV IRDIDLYRIE PWDLQEQCRI  60
   61 GYEEQNEWYF FSHKDKKYPT GTRTNRATMA GFWKATGRDK AVYDKTKLIG MRKTLVFYKG 120
  121 RAPNGKKSDW IMHEYRLESD ENAPPQEEGW VVCRAFKKRA TGQAKNT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.0
Match: 1ut4A
Description: Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [168-365]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETWSSSYFYD EVAPNGVNSV MDPIDYISKQ QHNIFGKGLM CKQELEGMVD GINYIQSNQF  60
   61 IQLPQLQSPS LPLMKRPSSS MSITSMDNNY NYKLPLADEE SFESFIRGED RRKKKKQVMM 120
  121 TGNWRELDKF VASQLMSQED NGTSSFAGHH IVNEDKNNND VEMDSSMFLS EREEENRFVS 180
  181 EFLSTNSDYD IGICVFDN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle