| Protein: | PME46_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 564 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PME46_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
546.0 | [0..1] | [564..1] |
|
Region A: Residues: [1-215] |
1 11 21 31 41 51
| | | | | |
1 MSSYGRLDEH EQAKLEASRK TKKRIAIIAI SSIVLVCIVV GAVVGTTARD NSKKPPTENN 60
61 GEPISVSVKA LCDVTLHKEK CFETLGSAPN ASRSSPEELF KYAVKVTITE LSKVLDGFSN 120
121 GEHMDNATSA AMGACVELIG LAVDQLNETM TSSLKNFDDL RTWLSSVGTY QETCMDALVE 180
181 ANKPSLTTFG ENHLKNSTEM TSNALAIITW LGKIA
|
| Detection Method: |  |
| Confidence: | 21.045757 |
| Match: | 1xg2B |
| Description: | Crystal structure of the complex between pectin methylesterase and its inhibitor protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [216-564] |
1 11 21 31 41 51
| | | | | |
1 DTVKFRRRRL LETGNAKVVV ADLPMMEGRR LLESGDLKKK ATIVVAKDGS GKYRTIGEAL 60
61 AEVEEKNEKP TIIYVKKGVY LENVRVEKTK WNVVMVGDGQ SKTIVSAGLN FIDGTPTFET 120
121 ATFAVFGKGF MARDMGFINT AGPAKHQAVA LMVSADLSVF YKCTMDAFQD TMYAHAQRQF 180
181 YRDCVILGTV DFIFGNAAVV FQKCEILPRR PMKGQQNTIT AQGRKDPNQN TGISIHNCTI 240
241 KPLDNLTDIQ TFLGRPWKDF STTVIMKSFM DKFINPKGWL PWTGDTAPDT IFYAEYLNSG 300
301 PGASTKNRVK WQGLKTSLTK KEANKFTVKP FIDGNNWLPA TKVPFNSDF
|
| Detection Method: | |
| Confidence: | 100.0 |
| Match: | 1gq8A |
| Description: | Pectin methylesterase PemA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.142826098671881 | bayes_pls_golite062009 |
