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View Structure Prediction Details

Protein: GDL10_ARATH
Organism: Arabidopsis thaliana
Length: 383 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL10_ARATH.

Description E-value Query
Range
Subject
Range
gi|10764858 - gi|10764858|gb|AAF24548.2|AC007508_11 F1K23.17 [Arabidopsis thaliana]
395.0 [0..1] [383..421]

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Predicted Domain #1
Region A:
Residues: [1-383]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLDSLVSF FLSTLFVTIV SSQTQCRNLE SIISFGDSIT DTGNLVGLSD RNHLPVTAFL  60
   61 PYGETFFHHP TGRSCNGRII IDFIAEFLGL PHVPPFYGSK NGNFEKGVNF AVAGATALET 120
  121 SILEKRGIYY PHSNISLGIQ LKTFKESLPN LCGSPTDCRD MIGNAFIIMG EIGGNDFNFA 180
  181 FFVNKTSEVK ELVPLVITKI SSAIVELVDM GGRTFLVPGN FPLGCSATYL TLYQTSNKEE 240
  241 YDPLTGCLTW LNDFSEYYNE KLQAELNRLS KLYPHVNIIY GDYFNALLRL YQEPSKFGFM 300
  301 DRPLPACCGL GGPYNFTLSK KCGSVGVKYC SDPSKYVNWD GVHMTEAAYK WIADGLLKGP 360
  361 YTIPSFHWLC LGSKIKSKES LDT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.18
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.471286748048633 bayes_pls_golite062009
catalytic activity 0.319044203629006 bayes_pls_golite062009
protein binding 0.0277911089352154 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle