| Protein: | PME38_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 474 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PME38_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
468.0 | [0..3] | [474..61] |
|
Region A: Residues: [1-148] |
1 11 21 31 41 51
| | | | | |
1 MVFGNEMCDE TPHPGECKTL LIKHKPIRST TQFLQVSVER TLDGAVKAKS DTYFLEPQFG 60
61 SKQAWEECMD LYEQTIHRLN ESVLCPKNVC SRSDVQAWLS TALTNLDTCQ EEMSELGVSS 120
121 HSLESITIDV INTLAINKRM EQNGKEFG
|
| Detection Method: |  |
| Confidence: | 17.522879 |
| Match: | 1xg2B |
| Description: | Crystal structure of the complex between pectin methylesterase and its inhibitor protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [149-474] |
1 11 21 31 41 51
| | | | | |
1 ISKITMKTLS IGEKVDVVVA QDGSGDYKTI QEAVNGAGER LKGSPRYVIH VKQGVYEEYV 60
61 NVGIKSNNIM ITGDGIGKTI ITGDKSKGRG FSTYKSATFV AEGDGFVGRD ITIRNTAGPE 120
121 NHQAVALRSN SDMSVFYRCS IEGYQDTLYV HSGRQFFREC DIYGTVDFIF GNAAAVLQNC 180
181 RIFARNPPNG VNTITAQSRF NPNQTTGIVI HNSVVKGAPG VQLGGVKTYL GRPWRSYART 240
241 VVIGTYLDTL IEPNGWIDWD NVTALSTLYY GEYQNSGPGS GTENRVDWAG FHVISDIQEA 300
301 REFTLPKFID SASWLPPTKV PFTINL
|
| Detection Method: | |
| Confidence: | 97.30103 |
| Match: | 1gq8A |
| Description: | Pectin methylesterase PemA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.142826098671881 | bayes_pls_golite062009 |
