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View Structure Prediction Details

Protein: VAC14_ARATH
Organism: Arabidopsis thaliana
Length: 743 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VAC14_ARATH.

Description E-value Query
Range
Subject
Range
gi|42570643 - gi|42570643|ref|NP_973395.1| binding [Arabidopsis thaliana]
444.0 [0..1] [743..1]

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Predicted Domain #1
Region A:
Residues: [1-743]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDALSAIPA AVHRNLSDKL YEKRKNAALE LENIVKNLTS SGDHDKISKV IEMLIKEFAK  60
   61 SPQANHRKGG LIGLAAVTVG LSTEAAQYLE QIVPPVINSF SDQDSRVRYY ACEALYNIAK 120
  121 VVRGDFIIFF NKIFDALCKL SADSDANVQS AAHLLDRLVK DIVTESDQFS IEEFIPLLKE 180
  181 RMNVLNPYVR QFLVGWITVL DSVPDIDMLG FLPDFLDGLF NMLSDSSHEI RQQADSALSE 240
  241 FLQEIKNSPS VDYGRMAEIL VQRAASPDEF TRLTAITWIN EFVKLGGDQL VRYYADILGA 300
  301 ILPCISDKEE KIRVVARETN EELRSIHVEP SDGFDVGAIL SVARRQLSSE FEATRIEALN 360
  361 WISTLLNKHR TEVLCFLNDI FDTLLKALSD SSDDVVLLVL EVHAGVAKDP QHFRQLIVFL 420
  421 VHNFRADNSL LERRGALIVR RMCVLLDAER VYRELSTILE GEDNLDFAST MVQALNLILL 480
  481 TSPELSKLRE LLKGSLVNRE GKELFVALYT SWCHSPMAII SLCLLAQAYQ HASVVIQSLV 540
  541 EEDINVKFLV QLDKLIRLLE TPIFTYLRLQ LLEPGRYTWL LKTLYGLLML LPQQSAAFKI 600
  601 LRTRLKTVPT YSFSTGNQIG RATSGVPFSQ YKHQNEDGDL EDDNINSSHQ GINFAVRLQQ 660
  661 FENVQNLHRG QARTRVNYSY HSSSSSTSKE VRRSEEQQQQ QQQQQQQQQQ QQRPPPSSTS 720
  721 SSVADNNRPP SRTSRKGPGQ LQL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 95.09691
Match: 2h4mA
Description: No description for 2h4mA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle