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View Structure Prediction Details

Protein: gi|4337175, gi|1...
Organism: Arabidopsis thaliana
Length: 179 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|4337175, gi|1....

Description E-value Query
Range
Subject
Range
gi|25404133, gi|... - gi|9954754|gb|AAG09105.1|AC009323_16 Unknown protein [Arabidopsis thaliana], pir||E96607 hypothetica...
207.0 [0..1] [172..1]

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Predicted Domain #1
Region A:
Residues: [1-179]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLVTEEVRA KAEMYTGDEI CREKTKCFLK EISMPNGLLP LKDIEEVGYD RESGVVWLKQ  60
   61 KKSITHKFTE IDKLVSYGTE VTAIVETGKI KKLTGVKAKE LLIWVTINEI YTEEPPTKIT 120
  121 FKTPTTLSRT FPVTAFIVPE EPAKEEPAKE EPAKEKSSEA TEAKEAVAIK EAVAVKEAA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.0
Match: 1yduA
Description: Solution NMR structure of At5g01610, an Arabidopsis thaliana protein containing DUF538 domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle