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View Structure Prediction Details

Protein: CM2_ARATH
Organism: Arabidopsis thaliana
Length: 265 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CM2_ARATH.

Description E-value Query
Range
Subject
Range
CM1_ARATH - Chorismate mutase 1, chloroplastic OS=Arabidopsis thaliana GN=CM1 PE=1 SV=3
434.0 [0..3] [265..79]

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Predicted Domain #1
Region A:
Residues: [1-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARVFESDSG SGCSNVLSLD LIRESLIRQE DTIVFSLIER AKFPLNSPAF EESRCLDSGS  60
   61 FSSLTEFFVR ETEIIQAKVG RYEYPEENPF FLENIPHSVF PTHKYPSALH PKALSVNINK 120
  121 QIWDIYFKEL LPLFVKPGDD GNYPSTAASD LACLQALSRR IHYGKFVAEV KFRDAPQDYE 180
  181 PAIRAQDREA LMKLLTFEKV EEMVKKRVQK KAETFGQEVK FNSGYGDESK KKYKVDPLLA 240
  241 SRIYGEWLIP LTKLVEVEYL LRRLD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 105.0
Match: 2csmA
Description: Allosteric chorismate mutase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
chorismate mutase activity 3.78733095924257 bayes_pls_golite062009
catalytic activity 1.09506175640279 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle