YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: LAC13_ARATH
Organism: Arabidopsis thaliana
Length: 569 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

No multiple sequence alignment data found for LAC13_ARATH.

Predicted Domain #1
Region A:
Residues: [1-569]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQLRPFFLL LAIFVASLVN AEVHFHEFVI QETPVKRLCR VHNSITVNGQ FPGPTLEVRN  60
   61 GDSLVITAIN KARYNISLHW HGIRQMRNPW ADGPEYITQC PIQPGGSYTY RFTMEDQEGT 120
  121 LWWHAHSRWL RATVYGALII RPPLSSPHYP FPVIPKREIT LLLGEWWDRN PMDVLNLAQF 180
  181 TGAAPNISDA FTINGQPGDL YRCSSQETLR FLVGSGEIVL LRVINSALNQ ELFFGVANHK 240
  241 LTVVAADASY TKPFSTNVIM LGPGQTTDVL LTADQPPAHY YMAAHAYNSA NAAFDNTTTT 300
  301 AILKYKDASC VTLQAKSQAR AIPAQLPGFN DTATAAAFTA QMKSPSKVKV PLEIDENLFF 360
  361 TVGLGLFNCP TPNTQRCQGP NGTRFTASIN NVSFVFPKQN SIMQAYYQGT PTGVFTTDFP 420
  421 PTPPVTFDYT GNVSRGLWQP TRGTKAYKLK FNSQVQIILQ DTSIVTTENH PMHLHGYEFY 480
  481 VVGTGVGNFN PNTDTSSFNL IDPPRRNTIG TPPGGWVAIR FVANNPGAWL MHCHIDSHIF 540
  541 WGLAMVFLVE NGEGHLQSVQ SPPLDLPQC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 90.30103
Match: 1aozA
Description: Ascorbate oxidase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle