| Protein: | GEM_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 299 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GEM_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
535.0 | [0..1] | [299..1] |
|
|
366.0 | [0..73] | [292..37] |
|
Region A: Residues: [1-150] |
1 11 21 31 41 51
| | | | | |
1 MEPPKGDTVV KTEVPVKDPS LSVVDSKTKG VEDANTEIAL SDEVEIETKG SDSTPVKAPS 60
61 RTSSGSKKSV HWSPELVSGS QEPDQKAASS SSAGSNPYIA RSPAETSDAS LKDTMETVKG 120
121 VLGRWGKRVA EAAKKTESLA GNTWQHLRTA
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.519 | c.55.1 | Actin-like ATPase domain |
| View | Download | 0.409 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.402 | d.129.4 | Cell-division protein ZipA, C-terminal domain |
| View | Download | 0.402 | d.129.4 | Cell-division protein ZipA, C-terminal domain |
| View | Download | 0.398 | d.110.2 | GAF domain-like |
| View | Download | 0.398 | d.110.2 | GAF domain-like |
| View | Download | 0.395 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.385 | a.39.2 | Insect pheromon/odorant-binding proteins |
| View | Download | 0.384 | a.1.1 | Globin-like |
| View | Download | 0.360 | b.40.4 | Nucleic acid-binding proteins |
|
Region A: Residues: [151-299] |
1 11 21 31 41 51
| | | | | |
1 PSFADAAMGR IAQSTKVFAE GGYEKIFRQT FETDPEEQLL NSFACYLSTS AGPVMGVLYI 60
61 SSAKLAYCSD NPLSYKNGDQ TEWSYYKVVI PLHQLKAVNP SASIVNPAEK YIQVISVDNH 120
121 EFWFMGFLNY DGAVTSLQDS LQAGALRSV
|
| Detection Method: | |
| Confidence: | 14.958607 |
| Match: | PF02893.11 |
| Description: | No description for PF02893.11 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.582 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.444 | N/A | N/A | d.109.3 | Description not found. |
| View | Download | 0.433 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.431 | N/A | N/A | a.79.1 | Antitermination factor NusB |
| View | Download | 0.423 | N/A | N/A | d.92.2 | beta-N-acetylhexosaminidase-like domain |
| View | Download | 0.423 | N/A | N/A | d.92.2 | beta-N-acetylhexosaminidase-like domain |
| View | Download | 0.356 | N/A | N/A | a.39.1 | EF-hand |
