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View Structure Prediction Details

Protein: GDL38_ARATH
Organism: Arabidopsis thaliana
Length: 387 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL38_ARATH.

Description E-value Query
Range
Subject
Range
GDL58_ARATH - GDSL esterase/lipase At3g50400 OS=Arabidopsis thaliana GN=At3g50400 PE=2 SV=1
373.0 [0..14] [387..7]

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Predicted Domain #1
Region A:
Residues: [1-387]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATRASTSSR VSPAFTFLVI FFLLSLTASV EAAGRGVNND KKGGGLGASF IFGDSLVDAG  60
   61 NNNYLSTLSR ANMKPNGIDF KASGGTPTGR FTNGRTIGDI VGEELGSANY AIPFLAPDAK 120
  121 GKALLAGVNY ASGGGGIMNA TGRIFVNRLG MDVQVDFFNT TRKQFDDLLG KEKAKDYIAK 180
  181 KSIFSITIGA NDFLNNYLFP LLSVGTRFTQ TPDDFIGDML EHLRDQLTRL YQLDARKFVI 240
  241 GNVGPIGCIP YQKTINQLDE NECVDLANKL ANQYNVRLKS LLEELNKKLP GAMFVHANVY 300
  301 DLVMELITNY DKYGFKSATK ACCGNGGQYA GIIPCGPTSS LCEERDKYVF WDPYHPSEAA 360
  361 NVIIAKQLLY GDVKVISPVN LSKLRDM

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.2
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.555413709926701 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle