| Protein: | DRP4C_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 669 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DRP4C_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
502.0 | [0..43] | [666..1] |
|
|
496.0 | [0..45] | [665..17] |
|
|
495.0 | [0..43] | [666..1] |
|
|
493.0 | [0..43] | [666..1] |
|
|
491.0 | [0..46] | [665..21] |
|
|
491.0 | [0..45] | [665..15] |
|
|
490.0 | [0..46] | [665..21] |
|
|
489.0 | [0..46] | [665..19] |
|
|
489.0 | [0..46] | [665..16] |
|
Region A: Residues: [1-373] |
1 11 21 31 41 51
| | | | | |
1 MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR 60
61 EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV PLVMRLQRSS SPEPEIWLEY 120
121 NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV 180
181 NGQPENIYEQ ISGMIMEYIE PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT 240
241 KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI 300
301 VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI 360
361 IGSAKESLLR ILV
|
| Detection Method: |  |
| Confidence: | 84.221849 |
| Match: | 2akaB |
| Description: | Structure of the nucleotide-free myosin II motor domain from Dictyostelium discoideum fused to the GTPase domain of dynamin 1 from Rattus norvegicus |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [374-557] |
1 11 21 31 41 51
| | | | | |
1 QGDFSEYPDD QNMHCTARLA DMLSQFSDSL QAKPKEVAEF LMDEIKILDE CKCVGLPNFI 60
61 PRSAFLAILS QHVDGIQDKP VEFINKIWDY IEDVLSSVTA KRSDNFPQIQ SSIKRAGRNL 120
121 ISKIKEQSVN RVMEIVEMEK LTDYTCNPEY MTSWTQKTSA QESFIDAVVK NENIPDYFSV 180
181 TGFG
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [558-669] |
1 11 21 31 41 51
| | | | | |
1 NVKISHLRKY HAHLLIPAFD MKMRITSYWK IVLRRIVDNL ALYLQLSVKS LVNTRFQKEI 60
61 VAEMVDPRDG GGVEKMLEES PLVASKREKL QNSIKLLKES KDAVAAIVDQ NC
|
| Detection Method: | |
| Confidence: | 25.920819 |
| Match: | PF02212.9 |
| Description: | No description for PF02212.9 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.761 | N/A | N/A | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.705 | N/A | N/A | a.47.5 | Description not found. |
| View | Download | 0.678 | N/A | N/A | a.47.5 | Description not found. |
| View | Download | 0.563 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.563 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.551 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.551 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.541 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.529 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.528 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
