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View Structure Prediction Details

Protein: gi|12324018, gi|...
Organism: Arabidopsis thaliana
Length: 316 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12324018, gi|....

Description E-value Query
Range
Subject
Range
gi|60468186 - gi|60468186|gb|EAL66196.1| hypothetical protein DDB0204910 [Dictyostelium discoideum]
gi|66812030, gi|... - gi|66812030|ref|XP_640194.1| hypothetical protein [Dictyostelium discoideum AX4], gi|60468186|gb|EAL...
162.0 [0..6] [291..213]

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Predicted Domain #1
Region A:
Residues: [1-147]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGERGETSN GREEEVIKVV VRNGSFYGGD DCSGDGDDGM TFVEIVVDAM MMTVTRVMKV  60
   61 EEGMTLEIYV TSVIPIGAMF AMTLWLGNTA YLYITVAFSQ MLKAIMPVAV FILGVCVGLE 120
  121 IMSCKMLLIM SVISFGVLVS SYGELNI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.88
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #2
Region A:
Residues: [148-316]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NWVGVVYQMG GIVSEALRLI LMEILVKRKG IKLNPLSLMY YMSPCSAICL FIPWIFLEKS  60
   61 KMDTWNFHVL VLSLNSLCTF ALNLSVFLVI SRTSALTIRI AGVVKDWLVV LVSALLFAET 120
  121 KLTIINLFGY AVAIVGVATY NNHKPKNGES ITLVSQSPKN SDKKPDGPL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 48.958607
Match: PF03151.7
Description: No description for PF03151.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle