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View Structure Prediction Details

Protein: NFYAA_ARATH
Organism: Arabidopsis thaliana
Length: 269 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NFYAA_ARATH.

Description E-value Query
Range
Subject
Range
gi|21536874 - gi|21536874|gb|AAM61206.1| transcription factor-like protein [Arabidopsis thaliana]
321.0 [0..1] [269..1]

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Predicted Domain #1
Region A:
Residues: [1-125]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTEELLSPP QTPWWNAFGS QPLTTESLSG EASDSFTGVK AVTTEAEQGV VDKQTSTTLF  60
   61 TFSPGGEKSS RDVPKPHVAF AMQSACFEFG FAQPMMYTKH PHVEQYYGVV SAYGSQRSSG 120
  121 RVMIP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [126-211]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKMETEEDGT IYVNSKQYHG IIRRRQSRAK AEKLSRCRKP YMHHSRHLHA MRRPRGSGGR  60
   61 FLNTKTADAA KQSKPSNSQS SEVFHP

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 29.677781
Match: PF02045.6
Description: No description for PF02045.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [212-269]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ENETINSSRE ANESNLSDSA VTSMDYFLSS SAYSPGGMVM PIKWNAAAMD IGCCKLNI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle