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View Structure Prediction Details

Protein: Y5126_ARATH
Organism: Arabidopsis thaliana
Length: 487 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y5126_ARATH.

Description E-value Query
Range
Subject
Range
gi|222629805, gi... - gi|222629805|gb|EEE61937.1| hypothetical protein OsJ_16683 [Oryza sativa Japonica Group], gi|1154614...
288.0 [0..1] [481..1]

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Predicted Domain #1
Region A:
Residues: [1-321]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCEVSKLSA LCCVSESGRS NPDVTGLDEE GRGESNDLPQ FREFSIETIR NATSGFAAEN  60
   61 IVSEHGERAP NVVYKGKLEN QRRIAVKRFN RKSWPDSRQF LEEAKAVGQL RNHRMANLLG 120
  121 CCYEDEERLL IAEFMPNETL AKHLFHWESQ PMKWAMRLRV ALHIAQALEY CTSKGRALYH 180
  181 DLNAYRVLFD DDANPRLSCF GLMKNSRDGK SYSTNLAFTP PEYLRTGRVT PESVIYSFGT 240
  241 LLLDLLSGKH IPPSHALDLI RDRNIQMLMD SGLEGQFSSD DGTELIRLAS RCLQYEPRER 300
  301 PNPKSLVSAM IPLQKDLEIA S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.522879
Match: 2qkwB
Description: No description for 2qkwB was found.

Predicted Domain #2
Region A:
Residues: [322-487]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HQLLGVPNSA TTTALSPLGE ACLRSDLTAI HEIIEKLGYK DDEGATTELS FQMWTDQMQD  60
   61 TLVFKKKGDS AFRHKDFAKA IECYSQFIEV GTMGSPTVHA RQSLCYLMND MPREALNNAM 120
  121 QAQVISPAWH IASYLQAVAL SALGQENEAH TALKDGAMLE SKRNPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.39794
Match: 2if4A
Description: No description for 2if4A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle