YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: LACS3_ARATH
Organism: Arabidopsis thaliana
Length: 665 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LACS3_ARATH.

Description E-value Query
Range
Subject
Range
gi|147900293, gi... - gi|28436862|gb|AAH46740.1| MGC53832 protein [Xenopus laevis], gi|147900293|ref|NP_001079665.1| simil...
561.0 [0..2] [657..45]

Back

Predicted Domain #1
Region A:
Residues: [1-665]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATGRYIVEV EKGKQGVDGG SPSVGPVYRS IYAKDGFPEP PDDLVSAWDI FRLSVEKSPN  60
   61 NPMLGRREIV DGKAGKYVWQ TYKEVHNVVI KLGNSIRTIG VGKGDKCGIY GANSPEWIIS 120
  121 MEACNAHGLY CVPLYDTLGA GAIEFIICHA EVSLAFAEEN KISELLKTAP KSTKYLKYIV 180
  181 SFGEVTNNQR VEAERHRLTI YSWDQFLKLG EGKHYELPEK RRSDVCTIMY TSGTTGDPKG 240
  241 VLLTNESIIH LLEGVKKLLK TIDEELTSKD VYLSYLPLAH IFDRVIEELC IYEAASIGFW 300
  301 RGDVKILIED IAALKPTVFC AVPRVLERIY TGLQQKLSDG GFVKKKLFNF AFKYKHKNME 360
  361 KGQPHEQASP IADKIVFKKV KEGLGGNVRL ILSGAAPLAA HIESFLRVVA CAHVLQGYGL 420
  421 TESCGGTFVS IPNELSMLGT VGPPVPNVDI RLESVPEMGY DALASNPRGE ICIRGKTLFS 480
  481 GYYKREDLTQ EVFIDGWLHT GDVGEWQPDG AMKIIDRKKN IFKLSQGEYV AVENLENIYS 540
  541 HVAAIESIWV YGNSYESYLV AVVCPSKIQI EHWAKEHKVS GDFESICRNQ KTKEFVLGEF 600
  601 NRVAKDKKLK GFELIKGVHL DTVPFDMERD LITPSYKMKR PQLLKYYQKE IDEMYKKNRE 660
  661 VQLRV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 133.0
Match: 2p2bA
Description: No description for 2p2bA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle