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View Structure Prediction Details

Protein: PUMP3_ARATH
Organism: Arabidopsis thaliana
Length: 305 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUMP3_ARATH.

Description E-value Query
Range
Subject
Range
gi|46249805 - gi|46249805|gb|AAH68561.1| Solute carrier family 25 (mitochondrial carrier; phosphate carrier), memb...
294.0 [0..4] [302..186]

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Predicted Domain #1
Region A:
Residues: [1-305]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERSRVTREA PTGTRILLAS LSAMVAESVT FPIDLTKTRM QLHGSGSASG AHRIGAFGVV  60
   61 SEIARKEGVI GLYKGLSPAI IRHLFYTPIR IIGYENLKGL IVRSETNNSE SLPLATKALV 120
  121 GGFSGVIAQV VASPADLVKV RMQADGRLVS QGLKPRYSGP IEAFTKILQS EGVKGLWKGV 180
  181 LPNIQRAFLV NMGELACYDH AKHFVIDKKI AEDNIFAHTL ASIMSGLAST SLSCPADVVK 240
  241 TRMMNQGENA VYRNSYDCLV KTVKFEGIRA LWKGFFPTWA RLGPWQFVFW VSYEKFRLLA 300
  301 GISSF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.69897
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle